Protein–RNA interactions for Protein: Q91WA3

Hdac11, Histone deacetylase 11, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac11Q91WA3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gm14127-201ENSMUST00000117906 678 ntBASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hdac11Q91WA3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Gm15376-201ENSMUST00000122258 783 ntBASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Gm37917-201ENSMUST00000194711 392 ntBASIC13.12□□□□□ -0.31
Hdac11Q91WA3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Gm15823-201ENSMUST00000064305 670 ntBASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdac11Q91WA3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.11□□□□□ -0.31
Hdac11Q91WA3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.11□□□□□ -0.31
Hdac11Q91WA3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.11□□□□□ -0.31
Hdac11Q91WA3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms