Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smg8Q8VE18 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Snord83b-201ENSMUST00000104546 94 ntBASIC14.02□□□□□ -0.17
Smg8Q8VE18 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm3961-201ENSMUST00000204425 994 ntBASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm6334-201ENSMUST00000207083 228 ntBASIC14.02□□□□□ -0.17
Smg8Q8VE18 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm8227-201ENSMUST00000223306 571 ntBASIC14.02□□□□□ -0.17
Smg8Q8VE18 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smg8Q8VE18 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm6023-201ENSMUST00000118217 606 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm13342-201ENSMUST00000121055 207 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm7584-201ENSMUST00000175829 940 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm43758-201ENSMUST00000199500 367 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm10608-202ENSMUST00000213924 676 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm9368-201ENSMUST00000219348 831 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gm9257-201ENSMUST00000221254 232 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Cts7-204ENSMUST00000225321 1257 ntBASIC14.01□□□□□ -0.17
Smg8Q8VE18 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smg8Q8VE18 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Gm45779-201ENSMUST00000212189 4064 ntBASIC14□□□□□ -0.17
Smg8Q8VE18 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smg8Q8VE18 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Gm3756-201ENSMUST00000169182 1355 ntBASIC14□□□□□ -0.17
Smg8Q8VE18 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14□□□□□ -0.17
Smg8Q8VE18 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Gm43134-201ENSMUST00000199434 1886 ntBASIC14□□□□□ -0.17
Smg8Q8VE18 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smg8Q8VE18 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14□□□□□ -0.17
Smg8Q8VE18 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14□□□□□ -0.17
Smg8Q8VE18 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14□□□□□ -0.17
Smg8Q8VE18 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smg8Q8VE18 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms