Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm44872-201ENSMUST00000207864 420 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lsm1Q8VC85 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lsm1Q8VC85 Syt7-204ENSMUST00000223586 1344 ntBASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Gm5354-201ENSMUST00000182417 973 ntBASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Gm42550-201ENSMUST00000201553 960 ntBASIC12.64□□□□□ -0.39
Lsm1Q8VC85 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Gm5867-201ENSMUST00000063197 592 ntBASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm1Q8VC85 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm6447-201ENSMUST00000118905 835 ntBASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm26315-201ENSMUST00000083890 321 ntBASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm1Q8VC85 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms