Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps39Q8R5L3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.21□□□□□ -0.3
Vps39Q8R5L3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps39Q8R5L3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps39Q8R5L3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.21□□□□□ -0.3
Vps39Q8R5L3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps39Q8R5L3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps39Q8R5L3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm38223-201ENSMUST00000194484 695 ntBASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps39Q8R5L3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps39Q8R5L3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms