Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm15240-201ENSMUST00000118156 720 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm27533-201ENSMUST00000183800 152 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm44335-201ENSMUST00000196879 141 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm44297-201ENSMUST00000198304 141 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm44346-201ENSMUST00000198851 141 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm18206-201ENSMUST00000207027 926 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm12403-201ENSMUST00000121384 959 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm18905-201ENSMUST00000205454 928 ntBASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nup35Q8R4R6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms