Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 AA543401-201ENSMUST00000164248 1269 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Gm5779-201ENSMUST00000218467 910 ntBASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Slf1Q8R3P9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.3□□□□□ -0.28
Slf1Q8R3P9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Gm8396-201ENSMUST00000057361 823 ntBASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slf1Q8R3P9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slf1Q8R3P9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slf1Q8R3P9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slf1Q8R3P9 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.29□□□□□ -0.28
Slf1Q8R3P9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms