Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm25948-201ENSMUST00000175334 112 ntBASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm15693-201ENSMUST00000120470 637 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm7774-201ENSMUST00000200064 533 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm17330-201ENSMUST00000221047 165 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nudcd3Q8R1N4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.15□□□□□ -0.31
Nudcd3Q8R1N4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nudcd3Q8R1N4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Gm27525-201ENSMUST00000184465 107 ntBASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Gm27772-201ENSMUST00000184900 187 ntBASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Gm18905-201ENSMUST00000205454 928 ntBASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nudcd3Q8R1N4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms