Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afjQ8R1M2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afjQ8R1M2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm27989-201ENSMUST00000184721 107 ntBASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Gm44872-201ENSMUST00000207864 420 ntBASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
H2afjQ8R1M2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
H2afjQ8R1M2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
H2afjQ8R1M2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
H2afjQ8R1M2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms