Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Gm16202-201ENSMUST00000117532 544 ntBASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Gm45384-201ENSMUST00000210451 277 ntBASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Gm9908-201ENSMUST00000211534 448 ntBASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atf7Q8R0S1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atf7Q8R0S1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Gm13612-201ENSMUST00000119276 390 ntBASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Gm6745-201ENSMUST00000199216 526 ntBASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Gm16372-201ENSMUST00000073088 450 ntBASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atf7Q8R0S1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atf7Q8R0S1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms