Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sf3a1Q8K4Z5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm8810-201ENSMUST00000172895 754 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm8602-201ENSMUST00000184045 607 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm16372-201ENSMUST00000073088 450 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sf3a1Q8K4Z5 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Gm7561-201ENSMUST00000211203 886 ntBASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sf3a1Q8K4Z5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gm16202-201ENSMUST00000117532 544 ntBASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gm17150-201ENSMUST00000165577 381 ntBASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sf3a1Q8K4Z5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms