Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm32999-201ENSMUST00000192693 562 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm8365-201ENSMUST00000197334 648 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm18893-201ENSMUST00000198416 943 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 AC166344.1-202ENSMUST00000224139 234 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm12165-201ENSMUST00000117047 342 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm13045-201ENSMUST00000119019 712 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm11450-201ENSMUST00000121144 333 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm29615-201ENSMUST00000185371 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28224-201ENSMUST00000186078 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm29001-201ENSMUST00000186177 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28292-201ENSMUST00000186593 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28101-201ENSMUST00000187608 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm29076-201ENSMUST00000187689 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28302-201ENSMUST00000187931 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28646-201ENSMUST00000188220 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28205-201ENSMUST00000189177 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm29032-201ENSMUST00000189797 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm28695-201ENSMUST00000190300 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm37448-201ENSMUST00000192795 697 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 AC124457.1-201ENSMUST00000198845 120 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ddx54Q8K4L0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx54Q8K4L0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms