Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Gm12015-201ENSMUST00000117065 843 ntBASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Gm13296-201ENSMUST00000117854 997 ntBASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Rmrp-201ENSMUST00000157463 271 ntBASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Gm32999-201ENSMUST00000192693 562 ntBASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 AL732506.1-201ENSMUST00000226420 281 ntBASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdk5rap2Q8K389 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Gm26361-201ENSMUST00000158868 186 ntBASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdk5rap2Q8K389 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Abhd11os-203ENSMUST00000222613 363 ntBASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdk5rap2Q8K389 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdk5rap2Q8K389 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdk5rap2Q8K389 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdk5rap2Q8K389 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cdk5rap2Q8K389 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gm7003-201ENSMUST00000195089 312 ntBASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gm9555-201ENSMUST00000200908 583 ntBASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 AC159205.5-202ENSMUST00000224849 386 ntBASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cdk5rap2Q8K389 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap2Q8K389 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap2Q8K389 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap2Q8K389 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap2Q8K389 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cdk5rap2Q8K389 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms