Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Gm17208-201ENSMUST00000168388 535 ntBASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Gm5523-201ENSMUST00000180415 997 ntBASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Gm38317-201ENSMUST00000195564 343 ntBASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Shtn1Q8K2Q9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm13461-201ENSMUST00000120980 662 ntBASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Shtn1Q8K2Q9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Mir6927-201ENSMUST00000184494 71 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 AA914427-201ENSMUST00000193194 1166 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm42997-202ENSMUST00000200321 985 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm5950-201ENSMUST00000213337 772 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm29787-201ENSMUST00000222129 849 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Shtn1Q8K2Q9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Shtn1Q8K2Q9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms