Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cchcr1Q8K2I2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.59■□□□□ 0.09
Cchcr1Q8K2I2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cchcr1Q8K2I2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Cchcr1Q8K2I2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cchcr1Q8K2I2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cchcr1Q8K2I2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cchcr1Q8K2I2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cchcr1Q8K2I2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Gm6447-201ENSMUST00000118905 835 ntBASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Gm16215-201ENSMUST00000161990 637 ntBASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cchcr1Q8K2I2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms