Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ShfQ8CG80 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ShfQ8CG80 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ShfQ8CG80 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.75□□□□□ -0.53
ShfQ8CG80 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm6447-201ENSMUST00000118905 835 ntBASIC11.75□□□□□ -0.53
ShfQ8CG80 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.75□□□□□ -0.53
ShfQ8CG80 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm26315-201ENSMUST00000083890 321 ntBASIC11.75□□□□□ -0.53
ShfQ8CG80 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
ShfQ8CG80 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ShfQ8CG80 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.75□□□□□ -0.53
ShfQ8CG80 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm15487-201ENSMUST00000122373 465 ntBASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm24694-201ENSMUST00000180054 110 ntBASIC11.74□□□□□ -0.53
ShfQ8CG80 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm27663-201ENSMUST00000184839 110 ntBASIC11.74□□□□□ -0.53
ShfQ8CG80 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm42550-201ENSMUST00000201553 960 ntBASIC11.74□□□□□ -0.53
ShfQ8CG80 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
ShfQ8CG80 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.74□□□□□ -0.53
ShfQ8CG80 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ShfQ8CG80 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
ShfQ8CG80 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
ShfQ8CG80 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ShfQ8CG80 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms