Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.14■□□□□ 0.18
Trim52Q8CDV4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim52Q8CDV4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim52Q8CDV4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim52Q8CDV4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim52Q8CDV4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm13736-201ENSMUST00000119272 253 ntBASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm16296-201ENSMUST00000159905 325 ntBASIC16.14■□□□□ 0.17
Trim52Q8CDV4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Trim52Q8CDV4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm24830-201ENSMUST00000102024 166 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm12058-201ENSMUST00000118614 437 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm25890-201ENSMUST00000177643 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm22614-201ENSMUST00000178300 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm22042-201ENSMUST00000082989 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm26232-201ENSMUST00000083360 166 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm24136-201ENSMUST00000083374 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm26110-201ENSMUST00000083971 165 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim52Q8CDV4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm2383-201ENSMUST00000181461 807 ntBASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm18827-201ENSMUST00000188341 790 ntBASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.12■□□□□ 0.17
Trim52Q8CDV4 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim52Q8CDV4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms