Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm2231-201ENSMUST00000125661 612 ntBASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm17420-201ENSMUST00000164753 153 ntBASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Prpf31Q8CCF0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Gm11978-201ENSMUST00000122315 466 ntBASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Mir1938-201ENSMUST00000158746 100 ntBASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Gm42693-201ENSMUST00000196779 631 ntBASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Prpf31Q8CCF0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf31Q8CCF0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf31Q8CCF0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms