Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm32999-201ENSMUST00000192693 562 ntBASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Gm12795-201ENSMUST00000117594 539 ntBASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cfap54Q8C6S9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm12266-201ENSMUST00000120311 962 ntBASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cfap54Q8C6S9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cfap54Q8C6S9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cfap54Q8C6S9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cfap54Q8C6S9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm13611-201ENSMUST00000118269 318 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm5904-201ENSMUST00000210286 865 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm18730-201ENSMUST00000218038 343 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm15711-201ENSMUST00000118889 535 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm23218-201ENSMUST00000158124 276 ntBASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.33□□□□□ -0.44
Cfap54Q8C6S9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms