Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Gm15711-201ENSMUST00000118889 535 ntBASIC17.37■□□□□ 0.37
Cps1Q8C196 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Gm45219-201ENSMUST00000205602 465 ntBASIC17.37■□□□□ 0.37
Cps1Q8C196 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.37■□□□□ 0.37
Cps1Q8C196 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.36■□□□□ 0.37
Cps1Q8C196 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cps1Q8C196 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 Gm14058-201ENSMUST00000116082 735 ntBASIC17.36■□□□□ 0.37
Cps1Q8C196 Gm9062-201ENSMUST00000117712 727 ntBASIC17.36■□□□□ 0.37
Cps1Q8C196 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC17.36■□□□□ 0.37
Cps1Q8C196 Gm27438-201ENSMUST00000183480 110 ntBASIC17.36■□□□□ 0.37
Cps1Q8C196 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Cps1Q8C196 AC141438.2-201ENSMUST00000215068 271 ntBASIC17.36■□□□□ 0.37
Cps1Q8C196 AC154252.2-201ENSMUST00000223593 767 ntBASIC17.36■□□□□ 0.37
Cps1Q8C196 AC135114.1-201ENSMUST00000228682 270 ntBASIC17.36■□□□□ 0.37
Cps1Q8C196 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC17.36■□□□□ 0.37
Cps1Q8C196 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cps1Q8C196 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cps1Q8C196 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.35■□□□□ 0.37
Cps1Q8C196 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.35■□□□□ 0.37
Cps1Q8C196 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Gm8566-201ENSMUST00000120174 465 ntBASIC17.35■□□□□ 0.37
Cps1Q8C196 Rmrp-201ENSMUST00000157463 271 ntBASIC17.35■□□□□ 0.37
Cps1Q8C196 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC17.35■□□□□ 0.37
Cps1Q8C196 AL732506.1-201ENSMUST00000226420 281 ntBASIC17.35■□□□□ 0.37
Cps1Q8C196 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC17.35■□□□□ 0.37
Cps1Q8C196 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Gm9996-201ENSMUST00000070359 913 ntBASIC17.35■□□□□ 0.37
Cps1Q8C196 Gm18626-201ENSMUST00000221512 1409 ntBASIC17.35■□□□□ 0.37
Cps1Q8C196 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cps1Q8C196 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cps1Q8C196 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Gm13611-201ENSMUST00000118269 318 ntBASIC17.34■□□□□ 0.37
Cps1Q8C196 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cps1Q8C196 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.34■□□□□ 0.37
Cps1Q8C196 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.34■□□□□ 0.37
Cps1Q8C196 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Cps1Q8C196 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cps1Q8C196 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cps1Q8C196 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cps1Q8C196 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cps1Q8C196 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cps1Q8C196 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.33■□□□□ 0.37
Cps1Q8C196 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cps1Q8C196 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cps1Q8C196 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cps1Q8C196 Mir680-2-201ENSMUST00000102163 110 ntBASIC17.33■□□□□ 0.37
Cps1Q8C196 Gm23251-201ENSMUST00000103773 110 ntBASIC17.33■□□□□ 0.37
Cps1Q8C196 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cps1Q8C196 AC159819.2-201ENSMUST00000216151 342 ntBASIC17.33■□□□□ 0.37
Cps1Q8C196 Gm6781-201ENSMUST00000038304 1242 ntBASIC17.33■□□□□ 0.37
Cps1Q8C196 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cps1Q8C196 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms