Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Gm5354-201ENSMUST00000182417 973 ntBASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Gm45668-201ENSMUST00000211271 493 ntBASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trerf1Q8BXJ2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm14928-201ENSMUST00000120198 477 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm11424-201ENSMUST00000121929 829 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm8515-201ENSMUST00000194852 576 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm9794-201ENSMUST00000202370 423 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trerf1Q8BXJ2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm18018-201ENSMUST00000198273 408 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.94□□□□□ -0.18
Trerf1Q8BXJ2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms