Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm45453-201ENSMUST00000211758 853 ntBASIC10.84□□□□□ -0.67
Smco3Q8BQM7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.84□□□□□ -0.67
Smco3Q8BQM7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Mir497b-201ENSMUST00000093601 125 ntBASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco3Q8BQM7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Syt7-205ENSMUST00000224135 1557 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 AC164629.2-201ENSMUST00000217916 270 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Smco3Q8BQM7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.82□□□□□ -0.68
Smco3Q8BQM7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms