Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp2bQ8BJF9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chmp2bQ8BJF9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chmp2bQ8BJF9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Mir7221-201ENSMUST00000184009 72 ntBASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chmp2bQ8BJF9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Chmp2bQ8BJF9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms