Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Gm9522-201ENSMUST00000182394 926 ntBASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Mir7684-201ENSMUST00000183858 60 ntBASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf38Q8BI21 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm43094-201ENSMUST00000196549 921 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Gm24447-201ENSMUST00000083977 338 ntBASIC12.74□□□□□ -0.37
Rnf38Q8BI21 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rnf38Q8BI21 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm15376-201ENSMUST00000122258 783 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm27772-201ENSMUST00000184900 187 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm29608-201ENSMUST00000190444 463 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm10576-201ENSMUST00000191927 825 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf38Q8BI21 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms