Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm12341-201ENSMUST00000119724 503 ntBASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm18624-201ENSMUST00000220966 658 ntBASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Gm2423-201ENSMUST00000074863 733 ntBASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Clrn3Q8BHH8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Mir874-201ENSMUST00000104769 76 ntBASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm15376-201ENSMUST00000122258 783 ntBASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm42550-201ENSMUST00000201553 960 ntBASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clrn3Q8BHH8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.4□□□□□ -0.43
Clrn3Q8BHH8 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.4□□□□□ -0.43
Clrn3Q8BHH8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clrn3Q8BHH8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 636.3 ms