Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Slc5a7Q8BGY9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Gm9719-201ENSMUST00000162765 543 ntBASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Gm19931-201ENSMUST00000198920 368 ntBASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Daam2-202ENSMUST00000224595 1926 ntBASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Slc5a7Q8BGY9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Gm12428-201ENSMUST00000119844 727 ntBASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Slc5a7Q8BGY9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Slc5a7Q8BGY9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms