Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gm13612-201ENSMUST00000119276 390 ntBASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gm7653-201ENSMUST00000214567 508 ntBASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atg4bQ8BGE6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Gm6244-201ENSMUST00000178732 841 ntBASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atg4bQ8BGE6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Gm7063-201ENSMUST00000186840 981 ntBASIC12.4□□□□□ -0.42
Atg4bQ8BGE6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms