Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Gm7287-201ENSMUST00000205267 602 ntBASIC13.02□□□□□ -0.33
Ubp1Q811S7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ubp1Q811S7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gm6447-201ENSMUST00000118905 835 ntBASIC13.01□□□□□ -0.33
Ubp1Q811S7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ubp1Q811S7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gm18473-201ENSMUST00000220543 868 ntBASIC13.01□□□□□ -0.33
Ubp1Q811S7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 BC043934-202ENSMUST00000185694 2356 ntBASIC13.01□□□□□ -0.33
Ubp1Q811S7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ubp1Q811S7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13□□□□□ -0.33
Ubp1Q811S7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Abhd6-203ENSMUST00000225234 1958 ntBASIC13□□□□□ -0.33
Ubp1Q811S7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13□□□□□ -0.33
Ubp1Q811S7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13□□□□□ -0.33
Ubp1Q811S7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm18630-201ENSMUST00000222109 1397 ntBASIC13□□□□□ -0.33
Ubp1Q811S7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Mir1894-201ENSMUST00000122802 81 ntBASIC13□□□□□ -0.33
Ubp1Q811S7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm5035-201ENSMUST00000215581 927 ntBASIC13□□□□□ -0.33
Ubp1Q811S7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ubp1Q811S7 Gm45242-201ENSMUST00000210666 2129 ntBASIC13□□□□□ -0.33
Ubp1Q811S7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubp1Q811S7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13□□□□□ -0.33
Ubp1Q811S7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubp1Q811S7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms