Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccdc116Q80X53 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc116Q80X53 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc116Q80X53 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc116Q80X53 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc116Q80X53 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc116Q80X53 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Mir7654-201ENSMUST00000185082 70 ntBASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Gm18624-201ENSMUST00000220966 658 ntBASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.92□□□□□ -0.34
Ccdc116Q80X53 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Gm27437-201ENSMUST00000183429 107 ntBASIC12.91□□□□□ -0.34
Ccdc116Q80X53 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc116Q80X53 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Gm7488-201ENSMUST00000117148 684 ntBASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Gm12859-201ENSMUST00000117834 427 ntBASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc116Q80X53 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms