Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf40bQ80W14 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf40bQ80W14 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.21■□□□□ 0.02
Prpf40bQ80W14 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf40bQ80W14 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf40bQ80W14 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.21■□□□□ 0.02
Prpf40bQ80W14 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Gm20482-202ENSMUST00000174729 825 ntBASIC15.2■□□□□ 0.02
Prpf40bQ80W14 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Prpf40bQ80W14 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf40bQ80W14 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Prpf40bQ80W14 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms