Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm26185-201ENSMUST00000157692 266 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm6458-201ENSMUST00000211573 635 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh19Q80TF3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Gm6013-201ENSMUST00000212264 699 ntBASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh19Q80TF3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm8805-201ENSMUST00000117848 313 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm19184-201ENSMUST00000196798 928 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 Gm45880-201ENSMUST00000213041 853 ntBASIC12.91□□□□□ -0.34
Pcdh19Q80TF3 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms