Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Gm7730-201ENSMUST00000212486 454 ntBASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Otub1Q7TQI3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm43094-201ENSMUST00000196549 921 ntBASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm42612-201ENSMUST00000197986 623 ntBASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm43170-201ENSMUST00000199827 612 ntBASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Otub1Q7TQI3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Mir874-201ENSMUST00000104769 76 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm12485-201ENSMUST00000119641 291 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm27772-201ENSMUST00000184900 187 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm10576-201ENSMUST00000191927 825 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Otub1Q7TQI3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.53□□□□□ -0.4
Otub1Q7TQI3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms