Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Gm23363-201ENSMUST00000175024 79 ntBASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Gm29787-201ENSMUST00000222129 849 ntBASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ddx55Q6ZPL9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Gm13736-201ENSMUST00000119272 253 ntBASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Gm27023-201ENSMUST00000182372 285 ntBASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Gm8959-201ENSMUST00000213150 571 ntBASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ddx55Q6ZPL9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gm13996-201ENSMUST00000118456 430 ntBASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gm11331-201ENSMUST00000119764 288 ntBASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Ddx55Q6ZPL9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ddx55Q6ZPL9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms