Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rnf220Q6PDX6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm29310-201ENSMUST00000185468 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21825-201ENSMUST00000185728 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm29109-201ENSMUST00000185895 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21896-201ENSMUST00000186520 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21873-201ENSMUST00000186728 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21794-201ENSMUST00000187056 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21880-201ENSMUST00000187275 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21826-201ENSMUST00000187451 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21198-201ENSMUST00000188393 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21749-201ENSMUST00000189343 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21901-201ENSMUST00000189568 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm29424-201ENSMUST00000189716 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm28599-201ENSMUST00000189838 694 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21867-201ENSMUST00000189917 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm29269-201ENSMUST00000190087 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21722-201ENSMUST00000190153 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm28423-201ENSMUST00000190701 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21899-201ENSMUST00000190745 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21910-201ENSMUST00000191163 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21849-201ENSMUST00000191571 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm28678-201ENSMUST00000191593 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm20910-201ENSMUST00000193268 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm21871-201ENSMUST00000194621 696 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm18206-201ENSMUST00000207027 926 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Rnf220Q6PDX6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf220Q6PDX6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf220Q6PDX6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms