Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gm18827-201ENSMUST00000188341 790 ntBASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Gm30285-201ENSMUST00000214614 422 ntBASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smchd1Q6P5D8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smchd1Q6P5D8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gm4986-201ENSMUST00000119731 549 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gm23363-201ENSMUST00000175024 79 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gm8227-201ENSMUST00000223306 571 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Cts7-204ENSMUST00000225321 1257 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smchd1Q6P5D8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms