Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.7■□□□□ 0.26
Clcn1Q64347 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Clcn1Q64347 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clcn1Q64347 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Clcn1Q64347 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clcn1Q64347 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.69■□□□□ 0.26
Clcn1Q64347 Gm2383-201ENSMUST00000181461 807 ntBASIC16.69■□□□□ 0.26
Clcn1Q64347 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.69■□□□□ 0.26
Clcn1Q64347 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcn1Q64347 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Gm13316-201ENSMUST00000140537 691 ntBASIC16.68■□□□□ 0.26
Clcn1Q64347 Gm26185-201ENSMUST00000157692 266 ntBASIC16.68■□□□□ 0.26
Clcn1Q64347 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.68■□□□□ 0.26
Clcn1Q64347 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.68■□□□□ 0.26
Clcn1Q64347 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.68■□□□□ 0.26
Clcn1Q64347 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clcn1Q64347 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Clcn1Q64347 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.68■□□□□ 0.26
Clcn1Q64347 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcn1Q64347 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Clcn1Q64347 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.67■□□□□ 0.26
Clcn1Q64347 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Clcn1Q64347 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.67■□□□□ 0.26
Clcn1Q64347 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clcn1Q64347 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.67■□□□□ 0.26
Clcn1Q64347 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clcn1Q64347 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcn1Q64347 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.67■□□□□ 0.26
Clcn1Q64347 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clcn1Q64347 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Morn2-202ENSMUST00000227729 656 ntBASIC16.66■□□□□ 0.26
Clcn1Q64347 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Clcn1Q64347 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn1Q64347 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms