Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm29615-201ENSMUST00000185371 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28224-201ENSMUST00000186078 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm29001-201ENSMUST00000186177 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28292-201ENSMUST00000186593 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28101-201ENSMUST00000187608 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm29076-201ENSMUST00000187689 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28302-201ENSMUST00000187931 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28646-201ENSMUST00000188220 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28205-201ENSMUST00000189177 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm29032-201ENSMUST00000189797 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm28695-201ENSMUST00000190300 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm37448-201ENSMUST00000192795 697 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scn9aQ62205 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scn9aQ62205 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Scn9aQ62205 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.19■□□□□ 0.02
Scn9aQ62205 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.19■□□□□ 0.02
Scn9aQ62205 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.19■□□□□ 0.02
Scn9aQ62205 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Gm15432-201ENSMUST00000121106 195 ntBASIC15.19■□□□□ 0.02
Scn9aQ62205 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.19■□□□□ 0.02
Scn9aQ62205 AC125209.1-201ENSMUST00000225812 766 ntBASIC15.19■□□□□ 0.02
Scn9aQ62205 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn9aQ62205 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn9aQ62205 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm43916-201ENSMUST00000205062 967 ntBASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm19187-201ENSMUST00000206781 892 ntBASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm45598-202ENSMUST00000210719 986 ntBASIC15.18■□□□□ 0.02
Scn9aQ62205 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.18■□□□□ 0.02
Scn9aQ62205 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.18■□□□□ 0.02
Scn9aQ62205 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scn9aQ62205 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn9aQ62205 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.17■□□□□ 0.02
Scn9aQ62205 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.17■□□□□ 0.02
Scn9aQ62205 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scn9aQ62205 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn9aQ62205 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms