Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.05□□□□□ -0.48
VcanQ62059 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 Mir1956-201ENSMUST00000157748 65 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.04□□□□□ -0.48
VcanQ62059 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.04□□□□□ -0.48
VcanQ62059 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.04□□□□□ -0.48
VcanQ62059 Gm45398-201ENSMUST00000210561 165 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Gm12036-201ENSMUST00000120008 530 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.04□□□□□ -0.48
VcanQ62059 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
VcanQ62059 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Gzmn-202ENSMUST00000225535 989 ntBASIC12.04□□□□□ -0.48
VcanQ62059 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VcanQ62059 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
VcanQ62059 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
VcanQ62059 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.03□□□□□ -0.48
VcanQ62059 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
VcanQ62059 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.03□□□□□ -0.48
VcanQ62059 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
VcanQ62059 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.03□□□□□ -0.48
VcanQ62059 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
VcanQ62059 Gm10731-201ENSMUST00000181171 448 ntBASIC12.03□□□□□ -0.48
VcanQ62059 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.03□□□□□ -0.48
VcanQ62059 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.03□□□□□ -0.48
VcanQ62059 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.03□□□□□ -0.48
VcanQ62059 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.03□□□□□ -0.48
VcanQ62059 Gm19187-201ENSMUST00000206781 892 ntBASIC12.03□□□□□ -0.48
VcanQ62059 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
VcanQ62059 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
VcanQ62059 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VcanQ62059 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
VcanQ62059 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.02□□□□□ -0.48
VcanQ62059 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
VcanQ62059 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
VcanQ62059 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VcanQ62059 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VcanQ62059 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VcanQ62059 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.02□□□□□ -0.48
VcanQ62059 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms