Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.54■□□□□ 0.08
Ctr9Q62018 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ctr9Q62018 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Gm13392-201ENSMUST00000117708 150 ntBASIC15.54■□□□□ 0.08
Ctr9Q62018 Gm11978-201ENSMUST00000122315 466 ntBASIC15.54■□□□□ 0.08
Ctr9Q62018 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.54■□□□□ 0.08
Ctr9Q62018 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.54■□□□□ 0.08
Ctr9Q62018 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.54■□□□□ 0.08
Ctr9Q62018 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.54■□□□□ 0.08
Ctr9Q62018 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ctr9Q62018 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ctr9Q62018 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.53■□□□□ 0.08
Ctr9Q62018 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm5187-201ENSMUST00000117317 991 ntBASIC15.53■□□□□ 0.08
Ctr9Q62018 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.53■□□□□ 0.08
Ctr9Q62018 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm26927-201ENSMUST00000182385 965 ntBASIC15.53■□□□□ 0.08
Ctr9Q62018 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.53■□□□□ 0.08
Ctr9Q62018 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.53■□□□□ 0.08
Ctr9Q62018 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm10268-201ENSMUST00000085340 555 ntBASIC15.53■□□□□ 0.08
Ctr9Q62018 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ctr9Q62018 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ctr9Q62018 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.52■□□□□ 0.08
Ctr9Q62018 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.52■□□□□ 0.08
Ctr9Q62018 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.52■□□□□ 0.08
Ctr9Q62018 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ctr9Q62018 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ctr9Q62018 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.52■□□□□ 0.07
Ctr9Q62018 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Ctr9Q62018 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.52■□□□□ 0.07
Ctr9Q62018 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ctr9Q62018 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ctr9Q62018 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ctr9Q62018 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ctr9Q62018 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ctr9Q62018 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.52■□□□□ 0.07
Ctr9Q62018 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ctr9Q62018 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ctr9Q62018 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.52■□□□□ 0.07
Ctr9Q62018 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ctr9Q62018 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.51■□□□□ 0.07
Ctr9Q62018 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ctr9Q62018 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ctr9Q62018 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ctr9Q62018 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ctr9Q62018 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ctr9Q62018 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms