Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Foxc1Q61572 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Foxc1Q61572 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Foxc1Q61572 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm22189-201ENSMUST00000103822 86 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Mir669o-201ENSMUST00000103898 96 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.88□□□□□ -0.83
Foxc1Q61572 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm24420-201ENSMUST00000176676 59 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm28766-201ENSMUST00000191086 234 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm37469-201ENSMUST00000193728 890 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm18905-201ENSMUST00000205454 928 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Foxc1Q61572 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm272-201ENSMUST00000222073 919 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 AC152169.2-201ENSMUST00000224558 613 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm6180-201ENSMUST00000065243 498 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm25131-201ENSMUST00000082653 151 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 AC122539.3-201ENSMUST00000218355 1431 ntBASIC9.88□□□□□ -0.83
Foxc1Q61572 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Foxc1Q61572 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Foxc1Q61572 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Foxc1Q61572 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm13385-201ENSMUST00000121089 220 ntBASIC9.87□□□□□ -0.83
Foxc1Q61572 Gm14603-201ENSMUST00000121275 448 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms