Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox17Q61473 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox17Q61473 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.34□□□□□ -0.43
Sox17Q61473 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox17Q61473 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox17Q61473 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Gm15467-201ENSMUST00000120582 445 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox17Q61473 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox17Q61473 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox17Q61473 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox17Q61473 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox17Q61473 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox17Q61473 Gm44335-201ENSMUST00000196879 141 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Gm44297-201ENSMUST00000198304 141 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Gm44346-201ENSMUST00000198851 141 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox17Q61473 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox17Q61473 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Sox17Q61473 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.33□□□□□ -0.44
Sox17Q61473 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox17Q61473 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox17Q61473 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox17Q61473 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sox17Q61473 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Gm24420-201ENSMUST00000176676 59 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Gm28630-201ENSMUST00000187806 498 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Gm10766-202ENSMUST00000194123 606 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Gm43474-201ENSMUST00000196415 774 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 Gm46209-201ENSMUST00000217912 553 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Gm5779-201ENSMUST00000218467 910 ntBASIC12.32□□□□□ -0.44
Sox17Q61473 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox17Q61473 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sox17Q61473 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox17Q61473 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox17Q61473 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms