Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.43□□□□□ -0.1
Col11a1Q61245 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Col11a1Q61245 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.43□□□□□ -0.1
Col11a1Q61245 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Col11a1Q61245 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.42□□□□□ -0.1
Col11a1Q61245 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Gm12795-201ENSMUST00000117594 539 ntBASIC14.42□□□□□ -0.1
Col11a1Q61245 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Gm8492-201ENSMUST00000182375 987 ntBASIC14.42□□□□□ -0.1
Col11a1Q61245 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.42□□□□□ -0.1
Col11a1Q61245 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.42□□□□□ -0.1
Col11a1Q61245 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col11a1Q61245 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Gm11989-201ENSMUST00000117240 672 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 Gm11362-201ENSMUST00000118838 850 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.41□□□□□ -0.1
Col11a1Q61245 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col11a1Q61245 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col11a1Q61245 Ginm1-202ENSMUST00000065124 300 ntBASIC14.41□□□□□ -0.1
Col11a1Q61245 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col11a1Q61245 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.4□□□□□ -0.1
Col11a1Q61245 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.4□□□□□ -0.1
Col11a1Q61245 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.4□□□□□ -0.1
Col11a1Q61245 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 202.8 ms