Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nr1h4Q60641 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Nr1h4Q60641 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nr1h4Q60641 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nr1h4Q60641 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nr1h4Q60641 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nr1h4Q60641 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.58□□□□□ -0.4
Nr1h4Q60641 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm27430-201ENSMUST00000184585 107 ntBASIC12.58□□□□□ -0.4
Nr1h4Q60641 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm44333-201ENSMUST00000197168 107 ntBASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.58□□□□□ -0.4
Nr1h4Q60641 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.58□□□□□ -0.4
Nr1h4Q60641 Chchd1-203ENSMUST00000224633 557 ntBASIC12.58□□□□□ -0.4
Nr1h4Q60641 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nr1h4Q60641 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.57□□□□□ -0.4
Nr1h4Q60641 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm27680-201ENSMUST00000184192 160 ntBASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm2756-201ENSMUST00000195851 400 ntBASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm44344-201ENSMUST00000200287 129 ntBASIC12.57□□□□□ -0.4
Nr1h4Q60641 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nr1h4Q60641 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nr1h4Q60641 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.57□□□□□ -0.4
Nr1h4Q60641 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms