Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim38Q5SZ99 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim38Q5SZ99 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim38Q5SZ99 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim38Q5SZ99 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.68□□□□□ -0.22
Trim38Q5SZ99 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim38Q5SZ99 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Gm15429-201ENSMUST00000151268 798 ntBASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim38Q5SZ99 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim38Q5SZ99 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms