Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm13884-201ENSMUST00000118103 829 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm11452-201ENSMUST00000122376 690 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm27300-201ENSMUST00000184085 97 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm27335-201ENSMUST00000184758 97 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm45098-201ENSMUST00000207179 657 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm5864-201ENSMUST00000202263 970 ntBASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Thap2-203ENSMUST00000218989 527 ntBASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav3-3Q5R1C3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav3-3Q5R1C3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms