Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.7■□□□□ 0.1
Rnf20Q5DTM8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf20Q5DTM8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm27701-201ENSMUST00000184498 110 ntBASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.68■□□□□ 0.1
Rnf20Q5DTM8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gm11434-201ENSMUST00000122379 629 ntBASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gm6152-201ENSMUST00000151704 340 ntBASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gm8515-201ENSMUST00000194852 576 ntBASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gm18473-201ENSMUST00000220543 868 ntBASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf20Q5DTM8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms