Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm11918-201ENSMUST00000121660 179 ntBASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm9794-201ENSMUST00000202370 423 ntBASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm9908-201ENSMUST00000211534 448 ntBASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14□□□□□ -0.17
Syne3Q4FZC9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Syne3Q4FZC9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14□□□□□ -0.17
Syne3Q4FZC9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm27701-201ENSMUST00000184498 110 ntBASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Syne3Q4FZC9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Syne3Q4FZC9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms