Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Gm25911-201ENSMUST00000157621 56 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim40Q3UWA4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim40Q3UWA4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim40Q3UWA4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim40Q3UWA4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim40Q3UWA4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim40Q3UWA4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms