Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Arhgef40Q3UPH7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Gm42769-201ENSMUST00000198576 1659 ntBASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Gm13296-201ENSMUST00000117854 997 ntBASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Gm12380-201ENSMUST00000119012 544 ntBASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Gm9555-201ENSMUST00000200908 583 ntBASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Arhgef40Q3UPH7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Arhgef40Q3UPH7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Gm42937-201ENSMUST00000197360 752 ntBASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Arhgef40Q3UPH7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gm45219-201ENSMUST00000205602 465 ntBASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gm19187-201ENSMUST00000206781 892 ntBASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gm44651-201ENSMUST00000207343 372 ntBASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gm10312-201ENSMUST00000078515 489 ntBASIC19■□□□□ 0.63
Arhgef40Q3UPH7 Gm44401-201ENSMUST00000204462 2375 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms