Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm43433-201ENSMUST00000196573 481 ntBASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nlrc4Q3UP24 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Mir874-201ENSMUST00000104769 76 ntBASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Gm8805-201ENSMUST00000117848 313 ntBASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Gm16177-201ENSMUST00000120728 718 ntBASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nlrc4Q3UP24 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Gm4271-201ENSMUST00000174444 973 ntBASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Gm28693-202ENSMUST00000190758 331 ntBASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nlrc4Q3UP24 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms