Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Gm18059-201ENSMUST00000208073 580 ntBASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Spg11Q3UHA3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Gm12943-201ENSMUST00000119616 210 ntBASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Spg11Q3UHA3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm11422-201ENSMUST00000118925 1103 ntBASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm12196-201ENSMUST00000120954 262 ntBASIC12□□□□□ -0.49
Spg11Q3UHA3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12□□□□□ -0.49
Spg11Q3UHA3 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12□□□□□ -0.49
Spg11Q3UHA3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
Spg11Q3UHA3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Gm8018-201ENSMUST00000173536 789 ntBASIC12□□□□□ -0.49
Spg11Q3UHA3 Mir3060-201ENSMUST00000175339 83 ntBASIC12□□□□□ -0.49
Spg11Q3UHA3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Spg11Q3UHA3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12□□□□□ -0.49
Spg11Q3UHA3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12□□□□□ -0.49
Spg11Q3UHA3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12□□□□□ -0.49
Spg11Q3UHA3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Spg11Q3UHA3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms